Motif View

Internal ID 18090643
Source Database TransTermHP TERM 32
Feature Type terminator
Name
Rho-independent transcription terminator TERM 32
Sequence GGGCGCGGTCCGCCGTCGGGCCGCGCCG
Look for more occurrences
Start 256986
End 257013
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa BWH030 adTwj-supercont1.5, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments TACCGCTGAAGCCGA(5' tail) GGGCGCGGTCCG(5' stem) CCGT(loop) CGGGCCGCGCCG(3' stem) TTTCCCCCCGTCCTG(3' tail). Confidence: 91. overlap 256987

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685