Motif View

Internal ID 18090073
Source Database TransTermHP TERM 6
Feature Type terminator
Name
Rho-independent transcription terminator TERM 6
Sequence GGCCCGCCTCCCGCAAGGGATGGCGGGCC
Look for more occurrences
Start 16981
End 17009
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa 3580 adTxz-supercont1.21, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GACGCCATAGCACAA(5' tail) GGCCCGCCATCCC(5' stem) TTGC(loop) GGGA-GGCGGGCC(3' stem) TTGGGATGGCGCGAA(3' tail). Confidence: 95. gap 1, overlap 16978

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685