| Internal ID | 18090072 | Source Database | TransTermHP TERM 5 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 5
|
| Sequence |
CAAGGCCCGCCTCCCGCAAGGGATGGCGGGCCTTG Look for more occurrences |
| Start | 16978 |
| End | 17012 |
| Strand | - |
| Genomic Context | |
| Replicon | Pseudomonas aeruginosa 3580 adTxz-supercont1.21, whole genome shotgun sequence. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | ACCGACGCCATAGCA(5' tail) CAAGGCCCGCCATCCC(5' stem) TTGC(loop) GGGA-GGCGGGCCTTG(3' stem) GGATGGCGCGAAATC(3' tail). Confidence: 100. gap 1, overlap 16981 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|