Internal ID | 18089083 | Source Database | TransTermHP TERM 8 |
Feature Type | terminator |
Name |
Rho-independent transcription terminator TERM 8
|
Sequence |
GCCCGGCATTCGCCGGGC Look for more occurrences |
Start | 35940 |
End | 35957 |
Strand | + |
Genomic Context | |
Replicon | Pseudomonas aeruginosa 3581 adTwT-supercont1.32, whole genome shotgun sequence. |
Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
Additional Comments | CAGAACCACGAAAAA(5' tail) GCCCGGC(5' stem) ATTC(loop) GCCGGGC(3' stem) TTTTTCGTTTTAATC(3' tail). Confidence: 100. opp_overlap 35933 35930 35940, overlap 35933 |
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|