Motif View

Internal ID 18089082
Source Database TransTermHP TERM 7
Feature Type terminator
Name
Rho-independent transcription terminator TERM 7
Sequence CGAAAAAGCCCGGCATTCGCCGGGCTTTTTCG
Look for more occurrences
Start 35933
End 35964
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa 3581 adTwT-supercont1.32, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GTCTGATCAGAACCA(5' tail) CGAAAAAGCCCGGC(5' stem) ATTC(loop) GCCGGGCTTTTTCG(3' stem) TTTTAATCTGCGGTC(3' tail). Confidence: 100. opp_overlap 35930 35933 35940, overlap 35940

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685