Motif View

Internal ID 18088144
Source Database TransTermHP TERM 16
Feature Type terminator
Name
Rho-independent transcription terminator TERM 16
Sequence CGAGGCCCGCCCAGTTGCGGGCCTCG
Look for more occurrences
Start 53194
End 53219
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa 3581 adTwT-supercont1.1, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments TCCCACAGTCGATGA(5' tail) CGAGGCCCGC(5' stem) CCAGTT(loop) GCGGGCCTCG(3' stem) TTTTTGGGGGAGGGG(3' tail). Confidence: 100.

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685