Motif View

Internal ID 18087908
Source Database TransTermHP TERM 13
Feature Type terminator
Name
Rho-independent transcription terminator TERM 13
Sequence GGCGCCTTCGGGCGCC
Look for more occurrences
Start 92343
End 92358
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa BWH029 adTxJ-supercont1.13, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CGCAGGATGAAAAAA(5' tail) GGCGCC(5' stem) CGAA(loop) GGCGCC(3' stem) TTTTCCCGTTGGGGG(3' tail). Confidence: 100. opp_overlap 92343

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685