Motif View

Internal ID 18087297
Source Database TransTermHP TERM 29
Feature Type terminator
Name
Rho-independent transcription terminator TERM 29
Sequence CGAGGCTCGCCCAGTTGCGGGCCTCG
Look for more occurrences
Start 127781
End 127806
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa BWH029 adTxJ-supercont1.2, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments TTCCACAGTCGATGA(5' tail) CGAGGCTCGC(5' stem) CCAGTT(loop) GCGGGCCTCG(3' stem) TTTTTGGGGGAGGGG(3' tail). Confidence: 100.

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685