Motif View

Internal ID 18085077
Source Database TransTermHP TERM 12
Feature Type terminator
Name
Rho-independent transcription terminator TERM 12
Sequence GGGCGCAACGGTCACGGCCGTTGCGCCC
Look for more occurrences
Start 16287
End 16314
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa 3577 adTvG-supercont1.39, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GGCAATCTGGAGGAA(5' tail) GGGCGCAACGGC(5' stem) CGTG(loop) ACCGTTGCGCCC(3' stem) TTCTTCATTCAGGAG(3' tail). Confidence: 91. opp_overlap 16284 16287

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685