Motif View

Internal ID 18084409
Source Database TransTermHP TERM 2
Feature Type terminator
Name
Rho-independent transcription terminator TERM 2
Sequence GGGGCCGGCAACGGCCCC
Look for more occurrences
Start 26306
End 26323
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa 3577 adTvG-supercont1.5, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments ACGAAAGTGCCTTAC(5' tail) GGGGCCG(5' stem) GCAA(loop) CGGCCCC(3' stem) TTTCTTTCGCTTCGA(3' tail). Confidence: 100.

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685