Motif View

Internal ID 18083205
Source Database TransTermHP TERM 23
Feature Type terminator
Name
Rho-independent transcription terminator TERM 23
Sequence GGCCCGCCTCGTGCGGGCC
Look for more occurrences
Start 105284
End 105302
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa 3576 adVri-supercont1.2, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GCGGCGGACGCAAAA(5' tail) GGCCCGC(5' stem) ACGAG(loop) GCGGGCC(3' stem) TGGGGAACATGGCGA(3' tail). Confidence: 95.

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685