Motif View

Internal ID 18076123
Source Database TransTermHP TERM 290
Feature Type terminator
Name
Rho-independent transcription terminator TERM 290
Sequence CGGCAGCCTCGCCGCCCGGCGAGGCTGCCC
Look for more occurrences
Start 1292674
End 1292703
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa BWH059 adTvw-supercont1.1, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GGGAAGGGAAGGACA(5' tail) GGGCAGCCTCGCC(5' stem) GGGC(loop) GGCGAGGCTGCCG(3' stem) GGGAATCACTGGGCG(3' tail). Confidence: 91. overlap 1292669

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685