Motif View

Internal ID 18074876
Source Database TransTermHP TERM 8
Feature Type terminator
Name
Rho-independent transcription terminator TERM 8
Sequence CGGCGCATCCCCAACGGGATGCGCCG
Look for more occurrences
Start 66760
End 66785
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa BWH057 adTyM-supercont1.9, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CGGCCGATGTGAAAA(5' tail) CGGCGCATCCC(5' stem) GTTG(loop) GGGATGCGCCG(3' stem) TACGCTTCAGCGGTT(3' tail). Confidence: 100.

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685