Motif View

Internal ID 18074706
Source Database TransTermHP TERM 96
Feature Type terminator
Name
Rho-independent transcription terminator TERM 96
Sequence CGCCGACCCTAGGGTCGGCG
Look for more occurrences
Start 479272
End 479291
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa BWH057 adTyM-supercont1.4, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CGCGCCATGCAAGAA(5' tail) CGCCGACC(5' stem) CTAG(loop) GGTCGGCG(3' stem) TTTTTTTATCCTCGC(3' tail). Confidence: 100. opp_overlap 479272

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685