Motif View

Internal ID 18073693
Source Database TransTermHP TERM 38
Feature Type terminator
Name
Rho-independent transcription terminator TERM 38
Sequence GGGCGTCCTTCCGGACGCCC
Look for more occurrences
Start 187069
End 187088
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa BWH056 adTwB-supercont1.5, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CCATGATCATCTTCA(5' tail) GGGCGTCC(5' stem) TTCC(loop) GGACGCCC(3' stem) TTCTTTTATCCCCCT(3' tail). Confidence: 100. overlap 187066

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685