Motif View

Internal ID 18073368
Source Database TransTermHP TERM 311
Feature Type terminator
Name
Rho-independent transcription terminator TERM 311
Sequence TCCCATGCCCCCGGCGGAACGCCGCCGGGGGCATGGTC
Look for more occurrences
Start 1062113
End 1062150
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa BWH056 adTwB-supercont1.2, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments AACAGGCAAGAAACA(5' tail) GACCATGCCCCCGGCGG(5' stem) CGTT(loop) CCGCCGGGGGCATGGGA(3' stem) TCAGGACTGGGCGGC(3' tail). Confidence: 100. overlap 1062111 1062115

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685