Motif View

Internal ID 18072092
Source Database TransTermHP TERM 446
Feature Type terminator
Name
Rho-independent transcription terminator TERM 446
Sequence CCCCGGCTCCGGCCGGGG
Look for more occurrences
Start 1745280
End 1745297
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa BWH055 adTzt-supercont1.1, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments TCCGGAAATGAAAAA(5' tail) CCCCGGC(5' stem) CGGA(loop) GCCGGGG(3' stem) TTTTCGCGAGGCGGG(3' tail). Confidence: 100. opp_overlap 1745280

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685