Motif View

Internal ID 18071686
Source Database TransTermHP TERM 20
Feature Type terminator
Name
Rho-independent transcription terminator TERM 20
Sequence CGCGCGCCGCCGAGGCCAGCGGCGGCGCGCG
Look for more occurrences
Start 166263
End 166293
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa BWH054 adTyv-supercont1.6, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CCGCTCCCGCAAAGA(5' tail) CGCGCGCCGCCG(5' stem) CTGGCCT(loop) CGGCGGCGCGCG(3' stem) GCGGCTCTCAGCGGC(3' tail). Confidence: 100. overlap 166261

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685