Motif View

Internal ID 18071280
Source Database TransTermHP TERM 223
Feature Type terminator
Name
Rho-independent transcription terminator TERM 223
Sequence CGGGGCGGCTATAATCGCCGCCCCG
Look for more occurrences
Start 847295
End 847319
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa BWH054 adTyv-supercont1.2, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GCTTTCCGATGCCTG(5' tail) CGGGGCGGCTA(5' stem) TAA(loop) TCGCCGCCCCG(3' stem) TTTTCCCGCTGCCGC(3' tail). Confidence: 100. overlap 847266

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685