| Internal ID | 18068669 | Source Database | TransTermHP TERM 30 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 30
|
| Sequence |
CGCCCCCTCCGCCGCGGCGGAGGGGGCA Look for more occurrences |
| Start | 170406 |
| End | 170433 |
| Strand | - |
| Genomic Context | |
| Replicon | Pseudomonas aeruginosa BWH052 adTvf-supercont1.1, whole genome shotgun sequence. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | GACGGCGCGGGAAGA(5' tail) TGCCCCCTCCGC(5' stem) CGCG(loop) GCGGAGGGGGCG(3' stem) CGCTCAGTTCTGCAG(3' tail). Confidence: 90. opp_overlap 170404 170398, overlap 170390 170391 170393 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|