Motif View

Internal ID 18066256
Source Database TransTermHP TERM 10
Feature Type terminator
Name
Rho-independent transcription terminator TERM 10
Sequence GGCCCGCCTCGTGCGGGCC
Look for more occurrences
Start 53828
End 53846
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa BWH049 adTyP-supercont1.5, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GCGGCGGACGCAAAA(5' tail) GGCCCGC(5' stem) ACGAG(loop) GCGGGCC(3' stem) TGGGGAACATGCGAG(3' tail). Confidence: 95.

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685