Motif View

Internal ID 18066047
Source Database TransTermHP TERM 67
Feature Type terminator
Name
Rho-independent transcription terminator TERM 67
Sequence GCCCGGCCGCTGCCGGGC
Look for more occurrences
Start 264426
End 264443
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa BWH049 adTyP-supercont1.3, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CGCGCCCATGAAAAA(5' tail) GCCCGGC(5' stem) AGCG(loop) GCCGGGC(3' stem) TTTTTCATGCAGCGG(3' tail). Confidence: 100. opp_overlap 264426

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685