Motif View

Internal ID 18061396
Source Database TransTermHP TERM 70
Feature Type terminator
Name
Rho-independent transcription terminator TERM 70
Sequence CCGGGCCTGGCGCCCGG
Look for more occurrences
Start 315821
End 315837
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa strain JMM contig025, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments AAAGGCATGAAAAAA(5' tail) CCGGGC(5' stem) GCCAG(loop) GCCCGG(3' stem) TTTCCGGTGTCGAAA(3' tail). Confidence: 100. opp_overlap 315821

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685