| Internal ID | 18061313 | Source Database | TransTermHP TERM 1 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 1
|
| Sequence |
CGGCGCGTCTCCATGCGGGAGAGCGCCG Look for more occurrences |
| Start | 16485 |
| End | 16512 |
| Strand | + |
| Genomic Context | |
| Replicon | Pseudomonas aeruginosa strain JMM contig022, whole genome shotgun sequence. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | CGAGTCGTTACGAAA(5' tail) CGGCGCGTCTCC(5' stem) ATGCG(loop) GGAGA-GCGCCG(3' stem) TTTTTGCATTTCAGC(3' tail). Confidence: 100. gap 1, opp_overlap 16485 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|