Motif View

Internal ID 18047596
Source Database TransTermHP TERM 10
Feature Type terminator
Name
Rho-independent transcription terminator TERM 10
Sequence CGGCGCTCACGGGGCGCCG
Look for more occurrences
Start 65761
End 65779
Strand +
Genomic Context
Replicon Pseudomonas sp. FH4 scf_29086_26.1_contig_1, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments ATTGGCATAAAAAAA(5' tail) CGGCGCTC(5' stem) ACG(loop) GGGCGCCG(3' stem) TTTTTATCTGCAGTG(3' tail). Confidence: 100. opp_overlap 65761

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685