Motif View

Internal ID 18036317
Source Database TransTermHP TERM 255
Feature Type terminator
Name
Rho-independent transcription terminator TERM 255
Sequence GCCCCGCCCCGCGGGGC
Look for more occurrences
Start 903128
End 903144
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa PA14 genomic scaffold acUKH-supercont1.1, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GTTGGCGATGAAAAA(5' tail) GCCCCGC(5' stem) GGG(loop) GCGGGGC(3' stem) TCTTCAGGGAGGGCT(3' tail). Confidence: 100. opp_overlap 903128

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685