Motif View

Internal ID 18035734
Source Database TransTermHP TERM 928
Feature Type terminator
Name
Rho-independent transcription terminator TERM 928
Sequence CCCCGGCCTGGTTGCCGGGG
Look for more occurrences
Start 4074854
End 4074873
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa BWHPSA004 genomic scaffold adgfZ-supercont1.1, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GCGCAAGACAAAAAA(5' tail) CCCCGGC(5' stem) AACCAG(loop) GCCGGGG(3' stem) CAATCGTCGTCGGCG(3' tail). Confidence: 100.

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685