Motif View

Internal ID 18029954
Source Database TransTermHP TERM 292
Feature Type terminator
Name
Rho-independent transcription terminator TERM 292
Sequence GCCCTCGGCACATGCCGGGGGC
Look for more occurrences
Start 1240538
End 1240559
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa E2 genomic scaffold adgft-supercont1.1, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CCCGATAACGAAAAA(5' tail) GCCCCCGGC(5' stem) ATGT(loop) GCCGAGGGC(3' stem) TTTGAATTTGGCTCC(3' tail). Confidence: 100. opp_overlap 1240538

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685