Motif View

Internal ID 17926935
Source Database TransTermHP TERM 1452
Feature Type terminator
Name
Rho-independent transcription terminator TERM 1452
Sequence GGCGTCGGAAGACGCC
Look for more occurrences
Start 6839610
End 6839625
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa 39016 chromosome, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments TGGTACTGAGGAAAG(5' tail) GGCGTC(5' stem) GGAA(loop) GACGCC(3' stem) TTTTTCATATCCGGG(3' tail). Confidence: 90. opp_overlap 6839610 6839609

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685