Motif View

Internal ID 17926706
Source Database TransTermHP TERM 1095
Feature Type terminator
Name
Rho-independent transcription terminator TERM 1095
Sequence GGCCGGCGAATGCCGGCC
Look for more occurrences
Start 5370822
End 5370839
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa 39016 chromosome, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GGCAAGAATGAAAAA(5' tail) GGCCGGC(5' stem) ATTC(loop) GCCGGCC(3' stem) TTTTTCGTGGATCGT(3' tail). Confidence: 100. opp_overlap 5370822, overlap 5370816 5370815

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685