| Internal ID | 17925159 | Source Database | TransTermHP TERM 170 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 170
|
| Sequence |
GCCCGCTCCCACATTTGACCGCATTCTAATGTGGGAGCGGGC Look for more occurrences |
| Start | 548366 |
| End | 548407 |
| Strand | + |
| Genomic Context | |
| Replicon | Pseudomonas sp. GM41(2012) ctg4, whole genome shotgun sequence. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | CCCCTTCGCGAGCAA(5' tail) GCCCGCTCCCACATTTGA(5' stem) CCGCAT(loop) TCTAATGTGGGAGCGGGC(3' stem) TTGCTCGCGAAGGCG(3' tail). Confidence: 100. opp_overlap 548366 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|