Motif View

Internal ID 17923205
Source Database TransTermHP TERM 168
Feature Type terminator
Name
Rho-independent transcription terminator TERM 168
Sequence CGCCTGGACGTGAACCGTCCGGGCG
Look for more occurrences
Start 915360
End 915384
Strand -
Genomic Context
Replicon Pseudomonas stutzeri KOS6 scaffold1, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments ATTCAGGAAATAAAA(5' tail) CGCCCGGACG(5' stem) GTTCA(loop) CGTCCAGGCG(3' stem) TTGGGTTGCCAGAGG(3' tail). Confidence: 100. opp_overlap 915360

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685