| Internal ID | 17920642 | Source Database | TransTermHP TERM 112 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 112
|
| Sequence |
TAAAAAAGCCCCAGTGATGGGGCTTTTTTA Look for more occurrences |
| Start | 374212 |
| End | 374241 |
| Strand | + |
| Genomic Context | |
| Replicon | Pseudomonas sp. HPB0071 genomic scaffold aczIi-supercont1.1, whole genome shotgun sequence. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | TGTAAGGGTCTCTCA(5' tail) TAAAAAAGCCCCA(5' stem) GTGA(loop) TGGGGCTTTTTTA(3' stem) TTGCCTGAACTTTTT(3' tail). Confidence: 100. opp_overlap 374219, overlap 374219 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|