Internal ID | 17914628 | Source Database | TransTermHP TERM 33 |
Feature Type | terminator |
Name |
Rho-independent transcription terminator TERM 33
|
Sequence |
GCCCCGCTTATGCGGGGC Look for more occurrences |
Start | 316662 |
End | 316679 |
Strand | + |
Genomic Context | |
Replicon | Pseudomonas sp. 2-92(2010) strain 2-92 scaffold5.1, whole genome shotgun sequence. |
Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
Additional Comments | CTGCACTAAGAAAGA(5' tail) GCCCCGC(5' stem) TTAT(loop) GCGGGGC(3' stem) TTTTTTAATTCCAGG(3' tail). Confidence: 100. opp_overlap 316660 316662 |
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|