| Internal ID | 17914334 | Source Database | TransTermHP TERM 219 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 219
|
| Sequence |
CAACAAAGCCCACCTCTTGGTGGGCTTTTTG Look for more occurrences |
| Start | 788336 |
| End | 788366 |
| Strand | - |
| Genomic Context | |
| Replicon | Pseudomonas sp. 2-92(2010) strain 2-92 scaffold2, whole genome shotgun sequence. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | GGTCACCCCTGAAAA(5' tail) CAA-AAAGCCCACC(5' stem) AAGA(loop) GGTGGGCTTTGTTG(3' stem) ACGTAGGTGCTATCA(3' tail). Confidence: 100. gap 1, opp_overlap 788342, overlap 788342 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|