Motif View

Internal ID 17910267
Source Database TransTermHP TERM 76
Feature Type terminator
Name
Rho-independent transcription terminator TERM 76
Sequence CGGCCCCCTGGCGGAGCGATCCGCCAGGGGGTTG
Look for more occurrences
Start 270426
End 270459
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa BWHPSA020 genomic scaffold adgeC-supercont1.9, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GTTGTCGGAAAAAAA(5' tail) CAACCCCCTGGCGGA(5' stem) TCGC(loop) TCCGCCAGGGGGCCG(3' stem) GGTCGACGCTTCAGC(3' tail). Confidence: 100. overlap 270429

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685