| Internal ID | 17904221 | Source Database | TransTermHP TERM 1 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 1
|
| Sequence |
GGCGCCTGCAGGCCAGTCGGCCCGCCTGAGCGGGTGAGGCGCCTGCAGGCGCG Look for more occurrences |
| Start | 8790 |
| End | 8842 |
| Strand | - |
| Genomic Context | Located within gene [H619_RS0108330] |
| Replicon | Pseudomonas parafulva DSM 17004 H619DRAFT_scaffold00013.13_C, whole genome shotgun sequence. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | TGGCCACACTGGAAA(5' tail) CGCGCCTGCAGGCGCCTCA-CCCGC(5' stem) TCAG(loop) GCGGGCCGACTGGCCTGCAGGCGCC(3' stem) GGGTCAATAGCGCGG(3' tail). Confidence: 100. gap 1, overlap 8791 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|