| Internal ID | 17903590 | Source Database | TransTermHP TERM 21 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 21
|
| Sequence |
AAAAACGCCCGGCTCATTGCCGGGCGTTTTG Look for more occurrences |
| Start | 56335 |
| End | 56365 |
| Strand | + |
| Genomic Context | |
| Replicon | Pseudomonas sp. CF149 soap_scaffs_149.Contig27, whole genome shotgun sequence. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | AAGACAGCCTGAACT(5' tail) AAAAACGCCCGGC(5' stem) TCATT(loop) GCCGGGCGTTTTG(3' stem) GTTTTCAGGCGTTCA(3' tail). Confidence: 95. opp_overlap 56340, overlap 56326 56340 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|