| Internal ID | 17902553 | Source Database | TransTermHP TERM 80 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 80
|
| Sequence |
CCGCTGCGGGAGCCGGCAACCGGCTCCCGCAAAGG Look for more occurrences |
| Start | 364468 |
| End | 364502 |
| Strand | - |
| Genomic Context | |
| Replicon | Pseudomonas sp. PAMC 25886 ctg7180000004495, whole genome shotgun sequence. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | GAAGCGCTGACAAAA(5' tail) CCTTTGCGGGAGCCGG(5' stem) TTG(loop) CCGGCTCCCGCAGCGG(3' stem) GATCACTCGCCGATG(3' tail). Confidence: 100. opp_overlap 364489 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|