Motif View

Internal ID 17894778
Source Database TransTermHP TERM 810
Feature Type terminator
Name
Rho-independent transcription terminator TERM 810
Sequence CGCCCGGGCGAGTTCGCCTGGGCG
Look for more occurrences
Start 3347857
End 3347880
Strand -
Genomic Context
Replicon Pseudomonas monteilii SB3078, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments ACTCGGATACAAAAA(5' tail) CGCCCAGGCG(5' stem) AACT(loop) CGCCCGGGCG(3' stem) CTTTACGGGGCGGTA(3' tail). Confidence: 100. opp_overlap 3347856 3347857 3347870

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685