Motif View

Internal ID 17893738
Source Database TransTermHP TERM 755
Feature Type terminator
Name
Rho-independent transcription terminator TERM 755
Sequence CCCGCTCCTACAGGTACGGCACAGGTTTCAAAAGCTGTGATATCCCTGTGGGAGCGGG
Look for more occurrences
Start 3068674
End 3068731
Strand -
Genomic Context
Replicon Pseudomonas monteilii SB3101, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CCCTTCGCGGGTAAA(5' tail) CCCGCTCCCACAGGGATATCACAGCTT(5' stem) TTGA(loop) AACCTGTGCCGTACCTGTAGGAGCGGG(3' stem) TTTACCCGCGAAGAG(3' tail). Confidence: 100. opp_overlap 3068674

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685