Motif View

Internal ID 17893737
Source Database TransTermHP TERM 754
Feature Type terminator
Name
Rho-independent transcription terminator TERM 754
Sequence CGGCCCGGAACGCTTTCCGGGCCG
Look for more occurrences
Start 3068577
End 3068600
Strand -
Genomic Context
Replicon Pseudomonas monteilii SB3101, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments AACTTTAAATGAAAA(5' tail) CGGCCCGGAA(5' stem) AGCG(loop) TTCCGGGCCG(3' stem) TTTACAGGGTGTTGC(3' tail). Confidence: 100. opp_overlap 3068577, overlap 3068571

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685