Motif View

Internal ID 17893669
Source Database TransTermHP TERM 609
Feature Type terminator
Name
Rho-independent transcription terminator TERM 609
Sequence GGCCCCCTTCGGGGGGCC
Look for more occurrences
Start 2392732
End 2392749
Strand -
Genomic Context
Replicon Pseudomonas monteilii SB3101, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GTTCTGTTGAAGAAA(5' tail) GGCCCCC(5' stem) CGAA(loop) GGGGGCC(3' stem) TCAAGCACAGCGATC(3' tail). Confidence: 100.

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685