Motif View

Internal ID 17893210
Source Database TransTermHP TERM 1460
Feature Type terminator
Name
Rho-independent transcription terminator TERM 1460
Sequence CGGGGCGGCTATAATCGCCGCCCCG
Look for more occurrences
Start 6086377
End 6086401
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa LES431, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GCTTTCCGATGCCTG(5' tail) CGGGGCGGCTA(5' stem) TAA(loop) TCGCCGCCCCG(3' stem) TTTTCCCGCTGCCGC(3' tail). Confidence: 100. overlap 6086348

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685