Motif View

Internal ID 17890696
Source Database TransTermHP TERM 834
Feature Type terminator
Name
Rho-independent transcription terminator TERM 834
Sequence CGGCGCATCCCCAACGGGATGCGCCG
Look for more occurrences
Start 3409400
End 3409425
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa SCV20265, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CGGCCGATGTGAAAA(5' tail) CGGCGCATCCC(5' stem) GTTG(loop) GGGATGCGCCG(3' stem) TACGCTTCAGCGGTT(3' tail). Confidence: 100.

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685