Motif View

Internal ID 17888937
Source Database TransTermHP TERM 290
Feature Type terminator
Name
Rho-independent transcription terminator TERM 290
Sequence CGAGGCCCGCCCAGTTGCGGGCCTCG
Look for more occurrences
Start 1269608
End 1269633
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa 62 genomic scaffold adgfr-supercont1.2, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments TTCCACAGTCGATGA(5' tail) CGAGGCCCGC(5' stem) CCAGTT(loop) GCGGGCCTCG(3' stem) TTTTTTGGGGAGGGG(3' tail). Confidence: 100.

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685