| Internal ID | 17877659 | Source Database | TransTermHP TERM 117 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 117
|
| Sequence |
CAGGACGGCGACCTTCGGGTCGCCGTCCTG Look for more occurrences |
| Start | 434996 |
| End | 435025 |
| Strand | + |
| Genomic Context | |
| Replicon | Pseudomonas aeruginosa 19660 genomic scaffold adgew-supercont1.5, whole genome shotgun sequence. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | GGGCCTTTTTATCCA(5' tail) CAGGACGGCGACC(5' stem) TTCG(loop) GGTCGCCGTCCTG(3' stem) CTTTTTGCCGCGGCA(3' tail). Confidence: 100. opp_overlap 435001, overlap 434995 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|