Motif View

Internal ID 17875164
Source Database TransTermHP TERM 836
Feature Type terminator
Name
Rho-independent transcription terminator TERM 836
Sequence GCCGCGCGCCGCCGAGGCCAGCGGCGGCGCGCGCC
Look for more occurrences
Start 3317318
End 3317352
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa S35004 genomic scaffold adgfR-supercont1.1, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GGGCCGCTGAGAGCC(5' tail) GCCGCGCGCCGCCG(5' stem) AGGCCAG(loop) CGGCGGCGCGCGCC(3' stem) TTTGCGGGAGCGGCA(3' tail). Confidence: 100. overlap 3317337

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685