Motif View

Internal ID 17873874
Source Database TransTermHP TERM 299
Feature Type terminator
Name
Rho-independent transcription terminator TERM 299
Sequence GGCCGCCAGCGGTTGCCCGCCGGCGGCC
Look for more occurrences
Start 1091314
End 1091341
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa X13273 genomic scaffold adgeE-supercont1.1, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GGCATTCATGCAAAA(5' tail) GGCCGCCGGCGG(5' stem) GCAA(loop) CCGCTGGCGGCC(3' stem) TTTTTTTTCGTACTG(3' tail). Confidence: 100. opp_overlap 1091314

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685