Motif View

Internal ID 17873529
Source Database TransTermHP TERM 143
Feature Type terminator
Name
Rho-independent transcription terminator TERM 143
Sequence CGGGGCGGCTATAATCGCCGCCCCG
Look for more occurrences
Start 535111
End 535135
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa BWHPSA001 genomic scaffold adges-supercont1.3, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GCTTTCCGATGCCTG(5' tail) CGGGGCGGCTA(5' stem) TAA(loop) TCGCCGCCCCG(3' stem) TTTTCCCGCTGCCGC(3' tail). Confidence: 100. overlap 535082

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685